For each stimulus condition, the two thresholds obtained from the interleaved staircases were averaged, and the tCS was calculated as 100/Ct, where Ct is the corresponding Michelson cone or rod contrast (%) at threshold.
Note that the gamut of the stimulator (expressed as cone or rod contrast) is limited by the spectral distribution of the LED primaries and by the photoreceptor fundamentals, namely, 24% for L-cone isolating stimuli, 22% for M-cone isolating stimuli, 89% for S-cone isolating stimuli, and 24% for rod-isolating stimuli. When subjects were unable to see the stimuli at the maximal available contrast, the threshold was assumed to be at this maximal contrast, as a conservative estimate. To estimate the effects of one or more variables (subject group: RP vs. normal; photoreceptor type; temporal frequency) we used mixed effect models.
34 The subject group was treated as the fixed effect and the other variables as random effects. We used a penalized quasilikelihood technique because the data were not normally distributed.
35
Furthermore, we calculated MDs over a low-frequency range (MDlow, 1, 2, and 4 Hz) and a high-frequency range (MDhigh, 8, 10, and 12 Hz). When subjects view L- and M-cone–isolating stimuli, and possibly also rod-isolating stimuli, these two ranges are considered to reflect flicker detection through different postreceptoral mechanisms (MDlow, parvocellular pathway; and MDhigh, magnocellular pathway; as described elsewhere in this article). S-cone–isolating stimuli are hardly perceivable at the high temporal frequencies. We can reach much higher S-cone contrasts with our equipment. The MD values were expressed in dB (1 dB = 0.1 log CS) and calculated by subtracting the age-adjusted log sensitivities of patients from the normal values derived from the measurements of the full tCS functions in nine subjects. When subjects were unable to perceive the maximal possible contrast, thresholds were not taken as equal to the gamut limits, but were treated as missing values. We used t-tests for post hoc pairwise comparisons to explore significant deviations from 0 in differences between losses in different photoreceptor types (paired data). Holm's method was used to correct for multiple testing (L-cones vs. rods, L-cones vs. S-cones, and rods vs. S-cones at low and high frequencies, respectively).