Triplex IF-IHC was performed for α–smooth muscle actin (α-SMA; myofibroblast marker), vimentin (mesenchymal cell marker, at a concentration where all corneal fibroblasts and myofibroblasts but only rare keratocytes were positive),
9,10 and keratocan (marker for keratocytes), using previously described methods
9 and primary antibodies confirmed by Western blotting and IF-IHC to recognize rabbit antigens or isotypic nonspecific control antibodies (ThermoFisher Scientific, Waltham, MA, USA) and previously described secondary fluorescent tagged antibodies (
Table 1).
9 IF-IHC was also performed for perlecan or collagen type IV with 4′,6-diamidino-2-phenylindole staining of nuclei using previously characterized primary and secondary antibodies (
Table 1).
9 The collagen type IV antibody (cat. AB769; Millipore, Temecula, CA, USA) used in this study was generated against purified human and bovine collagen type IV and affinity purified with human and bovine collagen type IV crosslinked to agarose and then cross-absorbed by the manufacturer with human and bovine collagens type I, II, III, V, and VI to eliminate cross-reactivity. This collagen type IV antibody was shown previously to bind rabbit collagen IV in IF-IHC
10 and binds the α-1/α-2 chains but not the α-3 to α-6 chains. Winston Kao, PhD, graciously provided the keratocyte-specific keratocan antibody raised against peptide H2N-LRLDGNEIKPPIPIDLVAC-OH.
9,10 Images were obtained at 100× total magnification on a Leica DM6B upright microscope equipped with an automated stage and Leica 7000 T camera using the LASX software (Leica Microsystems, GmbH, Wetzlar, Germany).
All images were converted to 600-pixel width × 448-pixel height 300 DPI images with Photoshop 23.5.2 (Adobe, San Jose, CA, USA) to prepare composite image figures and images for α-SMA quantitation in the anterior stroma using ImageJ 1.53a analysis software (National Institutes of Health, Bethesda, MD, USA).
10 The mean pixels of stromal α-SMA intensity were determined in a 600-pixel wide × 150-pixel high rectangle with ImageJ for each PED cornea. This analysis was also performed for four unwounded control corneas, four normal –3 D PRK 2-week postsurgery corneas, and four normal –9 D PRK 2-week postsurgery corneas from the same wound-healing study where these PEDs occurred to allow comparisons to the myofibroblasts generated in PED corneas.