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Articles April 2022

Machine Learning Prediction of Non-Coding Variant Impact in Human Retinal cis -Regulatory Elements

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Leah S. VandenBosch; Kelsey Luu; Andrew E. Timms; Shriya Challam; Yue Wu; Aaron Y. Lee; Timothy J. Cherry
TAGS: atac trial, datasets, genome, machine learning, retina, transcription factor, training, mutagenesis, gene frequency, vocabulary
Trans. Vis. Sci. Tech.. 2022; 11(4):16. doi: https://doi.org/10.1167/tvst.11.4.16

Includes: Supplemental Content

Data Science January 2022

UWHVF: A Real-World, Open Source Dataset of Perimetry Tests From the Humphrey Field Analyzer at the University of Washington

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Giovanni Montesano; Andrew Chen; Randy Lu; Cecilia S. Lee; Aaron Y. Lee
TAGS: datasets, perimetry, universities, visual fields
Trans. Vis. Sci. Tech.. 2022; 11(1):2. doi: https://doi.org/10.1167/tvst.11.1.1

Includes: Supplemental Content

Editorial July 2021

Data Science in Translational Vision Science and Technology

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Marco A. Zarbin; Aaron Y. Lee; Pearse A. Keane; Michael F. Chiang
TAGS: data science, technology, vision
Trans. Vis. Sci. Tech.. 2021; 10(8):20. doi: https://doi.org/10.1167/tvst.10.8.20

ARVO Annual Meeting Abstract June 2021

Are we doing better? Impact of treatment paradigm change on neovascular age-related macular degeneration treatment outcomes over the past decade. A big data analysis.

Roy Schwartz; Alasdair Warwick; Abraham Olvera-Barrios; Maria Pikoula; Aaron Y Lee; Spiros Denaxas; Paul Taylor; Catherine Egan; Usha Chakravarthy; Peck Lin Lip; Adnan Tufail

Invest. Ophthalmol. Vis. Sci.. 2021; 62(8):344. doi:

ARVO Annual Meeting Abstract June 2021

Using Fixed-Force Goldmann Applanation Tonometry to measure the Ocular Pulse Amplitude

Joanne C Wen; Theodore Spaide; Yue Wu; Aaron Y Lee

Invest. Ophthalmol. Vis. Sci.. 2021; 62(8):626. doi:

ARVO Annual Meeting Abstract June 2021

Associations between retinal artery/vein occlusions (RAVO) and risk of vascular dementia

Marian Blazes; Michael L. Lee; Laura E. Gibbons; Ryan T Yanagihara; Jason P. Kam; Aaron Y Lee; Eric B. Larson; Paul K. Crane; Cecilia S Lee

Invest. Ophthalmol. Vis. Sci.. 2021; 62(8):2830. doi:

ARVO Annual Meeting Abstract June 2021

Algorithmic optimization of residency matching for a win-win outcome

Yue Wu; Cecilia S Lee; Aaron Y Lee; Russell N Van Gelder

Invest. Ophthalmol. Vis. Sci.. 2021; 62(8):2648. doi:

ARVO Annual Meeting Abstract June 2021

Segmentation of reticular pseudodrusen (RPD) lesions in OCT B-scans using deep learning

Yelena Bagdasarova; Himeesh Kumar; Robyn H Guymer; Marian Blazes; Cecilia S Lee; Aaron Y Lee; Zhichao Wu

Invest. Ophthalmol. Vis. Sci.. 2021; 62(8):2138. doi:

ARVO Annual Meeting Abstract June 2021

Detecting Double Layer Signs with OCT volumes using a 3D Convolutional Neural Network (CNN)

Yuka Kihara; yingying shi; Cancan Lyu; Jin Yang; Liang Wang; Xiaoshuang Jiang; Mengxi Shen; Rita Laiginhas; Hironobu Fujiyoshi; Giovanni Gregori; Philip J Rosenfeld; Aaron Y Lee

Invest. Ophthalmol. Vis. Sci.. 2021; 62(8):2102. doi:

ARVO Annual Meeting Abstract June 2021

Automated detection of vascular leakage on fluorescein angiography

LeAnne Young; Jongwoo Kim; Mehmet Yakin; Henry Lin; David Dao; Shilpa Kodati; Sumit Sharma; Aaron Y Lee; Cecilia S Lee; H Nida Sen

Invest. Ophthalmol. Vis. Sci.. 2021; 62(8):2112. doi:

ARVO Annual Meeting Abstract June 2021

Collaborative Diabetic Retinopathy Severity Classification of Optical Coherence Tomography Data through Federated Learning

Timothy Tin Long Yu; Julian Lo; Da Ma; Pengxiao Zang; Julia Owen; Ruikang K Wang; Aaron Y Lee; Yali Jia; Marinko V Sarunic

Invest. Ophthalmol. Vis. Sci.. 2021; 62(8):1029. doi:

ARVO Annual Meeting Abstract June 2021

Emulated trial comparing the effectiveness of Bevacuzimab vs Aflibercept using an external control arm

Paul Taylor; Darren Thomas; Aaron Y Lee; Philipp L. Mueller; Roy Schwartz; Abraham Olvera-Barrios; Alasdair Warwick; Praveen J Patel; Tjebo Herren; Catherine Egan; Adnan Tufail

Invest. Ophthalmol. Vis. Sci.. 2021; 62(8):454. doi:

ARVO Annual Meeting Abstract June 2021

Outcomes and risk of reactivation of myopic CNV: Multi-Centre Study with long term follow up

Moawiya Alshunnar; Roy Schwartz; Alasdair Warwick; Abraham Olvera-Barrios; Maria Pikoula; Darren Thomas; Aaron Y Lee; Spiros Denaxas; Catherine Egan; Usha Chakravarthy; Peck Lin Lip; Paul Taylor; Adnan Tufail

Invest. Ophthalmol. Vis. Sci.. 2021; 62(8):653. doi:

ARVO Annual Meeting Abstract June 2021

Prevalence and Associations of Dome-Shape Macular Configuration – A Macular Curvature Study on UK Biobank data

Philipp L. Mueller; Yuka Kihara; Abraham Olvera-Barrios; Roy Schwartz; Alasdair Warwick; Catherine Egan; Katie M. Williams; Aaron Y Lee; Adnan Tufail; UK Biobank Eyes and Vision Consortium

Invest. Ophthalmol. Vis. Sci.. 2021; 62(8):1920. doi:

ARVO Annual Meeting Abstract June 2021

Foveal curvature and its associations in UK Biobank participants

Abraham Olvera-Barrios; Yuka Kihara; Alasdair Warwick; Philipp L. Mueller; Catherine Egan; Katie Williams; Aaron Y Lee; Adnan Tufail

Invest. Ophthalmol. Vis. Sci.. 2021; 62(8):2304. doi:

ARVO Annual Meeting Abstract June 2021

Uveitis incidence in the United States (US): a database study using the Intelligent Research in Sight (IRIS)® Registry

Timothy-Paul Kung; Matthew S. Hunt; Matthew McKay; Ryan T Yanagihara; Aaron Y Lee; Russell N Van Gelder; Cecilia S Lee

Invest. Ophthalmol. Vis. Sci.. 2021; 62(8):1404. doi:

ARVO Annual Meeting Abstract June 2021

Diabetic retinopathy and dementia link is more than microvascular disease and poor glycemic control mechanisms

Cecilia S Lee; Yu-Ru Su; Chloe Krakauer; Rod Walker; Aaron Y Lee; Ann O’Hare; Eric B. Larson; Paul K. Crane

Invest. Ophthalmol. Vis. Sci.. 2021; 62(8):1171. doi:

ARVO Annual Meeting Abstract June 2021

Student becomes teacher: faster deep learning (DL) lightweight models (LWM) for automated detection of abnormal OCT B-scans using student-teacher framework

Julia Owen; Marian Blazes; Niranchana Manivannan; Gary C Lee; Sophia Yu; Mary K Durbin; Rishi P. Singh; Katherine Talcott; Alline G.R. Melo; Tyler Greenlee; Eric R. Chen; Thais F. Conti; Cecilia S Lee; Aaron Y Lee

Invest. Ophthalmol. Vis. Sci.. 2021; 62(8):1028. doi:

ARVO Annual Meeting Abstract June 2021

Clinical Characteristics of Patients with Uveitis at Presentation: a Database Study using the American Academy of Ophthalmology (AAO) Intelligent Research In Sight (IRIS ® ) Registry

Ryan T Yanagihara; Matthew S Hunt; K Matthew McKay; Timothy-Paul Kung; Aaron Y Lee; Russell N Van Gelder; Cecilia S Lee

Invest. Ophthalmol. Vis. Sci.. 2021; 62(8):3479. doi:

ARVO Annual Meeting Abstract June 2021

Artificial intelligence automation of eyelid and periorbital measurements

Alexandra Van Brummen; Julia P Owen; Theodore Spaide; Colin Froines; Randy Lu; Megan Lacy; Marian Blazes; Cecilia S Lee; Aaron Y Lee; Matthew Zhang

Invest. Ophthalmol. Vis. Sci.. 2021; 62(8):2149. doi:

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Machine Learning Prediction of Non-Coding Variant Impact in Human Retinal cis -Regulatory Elements

UWHVF: A Real-World, Open Source Dataset of Perimetry Tests From the Humphrey Field Analyzer at the University of Washington

Data Science in Translational Vision Science and Technology

Are we doing better? Impact of treatment paradigm change on neovascular age-related macular degeneration treatment outcomes over the past decade. A big data analysis.

Using Fixed-Force Goldmann Applanation Tonometry to measure the Ocular Pulse Amplitude

Associations between retinal artery/vein occlusions (RAVO) and risk of vascular dementia

Algorithmic optimization of residency matching for a win-win outcome

Segmentation of reticular pseudodrusen (RPD) lesions in OCT B-scans using deep learning

Detecting Double Layer Signs with OCT volumes using a 3D Convolutional Neural Network (CNN)

Automated detection of vascular leakage on fluorescein angiography

Collaborative Diabetic Retinopathy Severity Classification of Optical Coherence Tomography Data through Federated Learning

Emulated trial comparing the effectiveness of Bevacuzimab vs Aflibercept using an external control arm

Outcomes and risk of reactivation of myopic CNV: Multi-Centre Study with long term follow up

Prevalence and Associations of Dome-Shape Macular Configuration – A Macular Curvature Study on UK Biobank data

Foveal curvature and its associations in UK Biobank participants

Uveitis incidence in the United States (US): a database study using the Intelligent Research in Sight (IRIS)® Registry

Diabetic retinopathy and dementia link is more than microvascular disease and poor glycemic control mechanisms

Student becomes teacher: faster deep learning (DL) lightweight models (LWM) for automated detection of abnormal OCT B-scans using student-teacher framework

Clinical Characteristics of Patients with Uveitis at Presentation: a Database Study using the American Academy of Ophthalmology (AAO) Intelligent Research In Sight (IRIS ® ) Registry

Artificial intelligence automation of eyelid and periorbital measurements

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