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Artificial Intelligence March 2023

AxoNet 2.0: A Deep Learning-Based Tool for Morphometric Analysis of Retinal Ganglion Cell Axons

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Vidisha Goyal; A. Thomas Read; Matthew D. Ritch; Bailey G. Hannon; Gabriela Sanchez Rodriguez; Dillon M. Brown; Andrew J. Feola; Adam Hedberg-Buenz; Grant A. Cull; Juan Reynaud; Mona K. Garvin; Michael G. Anderson; Claude F. Burgoyne; C. Ross Ethier
TAGS: axon, datasets, learning
Trans. Vis. Sci. Tech.. 2023; 12(3):9. https://doi.org/10.1167/tvst.12.3.9

Includes: Supplemental Content

Glaucoma September 2022

Biological Correlations and Confounders for Quantification of Retinal Ganglion Cells by Optical Coherence Tomography Based on Studies of Outbred Mice

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Adam Hedberg-Buenz; Kacie J. Meyer; Carly J. van der Heide; Wenxiang Deng; Kyungmoo Lee; Dana A. Soukup; Monica Kettelson; Danielle Pellack; Hannah Mercer; Kai Wang; Mona K. Garvin; Michael D. Abramoff; Michael G. Anderson
TAGS: axon, diagnostic imaging, mice, optic nerve, optical coherence tomography, retina, retinal ganglion cells, spectral domain-optical coherence tomography
Trans. Vis. Sci. Tech.. 2022; 11(9):17. https://doi.org/10.1167/tvst.11.9.17

Includes: Supplemental Content

ARVO Annual Meeting Abstract June 2022

Novel risk factor gene for POAG identified with GWAS of Ocular Hypertension Treatment Study

John H Fingert; Adam Hedberg-Buenz; Benjamin Roos; Erin Boese; Nathan Sears; Andrew Pouw; Young H Kwon; Wallace Alward; Robert F Mullins; Edwin M Stone; Michael G. Anderson; Mae Gordon; Michael A Kass; Kai Wang; Todd E Scheetz

Invest. Ophthalmol. Vis. Sci.. 2022; 63(7):4017 – A0359.

Perspective February 2022

Consensus Recommendation for Mouse Models of Ocular Hypertension to Study Aqueous Humor Outflow and Its Mechanisms

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Colleen M. McDowell; Krishnakumar Kizhatil; Michael H. Elliott; Darryl R. Overby; Joseph van Batenburg-Sherwood; J. Cameron Millar; Markus H. Kuehn; Gulab Zode; Ted S. Acott; Michael G. Anderson; Sanjoy K. Bhattacharya; Jacques A. Bertrand; Terete Borras; Diane E. Bovenkamp; Lin Cheng; John Danias; Michael Lucio De Ieso; Yiqin Du; Jennifer A. Faralli; Rudolf Fuchshofer; Preethi S. Ganapathy; Haiyan Gong; Samuel Herberg; Humberto Hernandez; Peter Humphries; Simon W. M. John; Paul L. Kaufman; Kate E. Keller; Mary J. Kelley; Ruth A. Kelly; David Krizaj; Ajay Kumar; Brian C. Leonard; Raquel L. Lieberman; Paloma Liton; Yutao Liu; Katy C. Liu; Navita N. Lopez; Weiming Mao; Timur Mavlyutov; Fiona McDonnell; Gillian J. McLellan; Philip Mzyk; Andrews Nartey; Louis R. Pasquale; Gaurang C. Patel; Padmanabhan P. Pattabiraman; Donna M. Peters; Vijaykrishna Raghunathan; Ponugoti Vasantha Rao; Naga Rayana; Urmimala Raychaudhuri; Ester Reina-Torres; Ruiyi Ren; Douglas Rhee; Uttio Roy Chowdhury; John R. Samples; E. Griffen Samples; Najam Sharif; Joel S. Schuman; Val C. Sheffield; Cooper H. Stevenson; Avinash Soundararajan; Preeti Subramanian; Chenna Kesavulu Sugali; Yang Sun; Carol B. Toris; Karen Y. Torrejon; Amir Vahabikashi; Janice A. Vranka; Ting Wang; Colin E. Willoughby; Chen Xin; Hongmin Yun; Hao F. Zhang; Michael P. Fautsch; Ernst R. Tamm; Abbot F. Clark; C. Ross Ethier; W. Daniel Stamer
TAGS: eye, mice, ocular hypertension, intraocular pressure, perfusion
Invest. Ophthalmol. Vis. Sci.. 2022; 63(2):12. https://doi.org/10.1167/iovs.63.2.12

Articles December 2021

AxonDeep: Automated Optic Nerve Axon Segmentation in Mice With Deep Learning

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Wenxiang Deng; Adam Hedberg-Buenz; Dana A. Soukup; Sima Taghizadeh; Kai Wang; Michael G. Anderson; Mona K. Garvin
TAGS: axon, deep learning, mice, optic nerve, training
Trans. Vis. Sci. Tech.. 2021; 10(14):22. https://doi.org/10.1167/tvst.10.14.22

Includes: Supplemental Content

Retina June 2021

The Retinal Ganglion Cell Response to Blast-Mediated Traumatic Brain Injury Is Genetic Background Dependent

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Matthew M. Harper; Nickolas Boehme; Laura M. Dutca; Michael G. Anderson
TAGS: basic local alignment search tool, blast injuries, genetic background, genetics, mice, retinal ganglion cells, traumatic brain injuries, phenotype
Invest. Ophthalmol. Vis. Sci.. 2021; 62(7):13. https://doi.org/10.1167/iovs.62.7.13

Includes: Supplemental Content

Retina October 2019

Blast Preconditioning Protects Retinal Ganglion Cells and Reveals Targets for Prevention of Neurodegeneration Following Blast-Mediated Traumatic Brian Injury

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Matthew M. Harper; Addison W. Woll; Lucy P. Evans; Michael Delcau; Abhigna Akurathi; Adam Hedberg-Buenz; Dana A. Soukup; Nickolas Boehme; Marco M. Hefti; Laura M. Dutca; Michael G. Anderson; Alexander G. Bassuk
TAGS: basic local alignment search tool, blast injuries, mice, wounds and injuries, nerve degeneration, retinal ganglion cells, prevention, rna
Invest. Ophthalmol. Vis. Sci.. 2019; 60(13):4159-4170. https://doi.org/10.1167/iovs.19-27565

Includes: Supplemental Content

ARVO Annual Meeting Abstract July 2019

Correlation of retinal ganglion cell metrics made in vivo using SD-OCT versus ex vivo using quantitative histology in Diversity Outbred mice

Michael G Anderson; Adam Hedberg-Buenz; Carly van der Heide; Kacie Meyer; Kyungmoo Lee; Michael David Abramoff

Invest. Ophthalmol. Vis. Sci.. 2019; 60(9):5604.

Retina June 2019

Blast-Mediated Traumatic Brain Injury Exacerbates Retinal Damage and Amyloidosis in the APPswePSENd19e Mouse Model of Alzheimer's Disease

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Matthew M. Harper; Adam Hedberg-Buenz; Judith Herlein; Eric E. Abrahamson; Michael G. Anderson; Markus H. Kuehn; Randy H. Kardon; Pieter Poolman; Milos D. Ikonomovic
TAGS: alzheimer's disease, amyloidosis, basic local alignment search tool, mice, nerve degeneration, traumatic brain injuries, optic nerve, brain, retina, blast injuries
Invest. Ophthalmol. Vis. Sci.. 2019; 60(7):2716-2725. https://doi.org/10.1167/iovs.18-26353

Retina May 2019

The Efemp1 R345W Macular Dystrophy Mutation Causes Amplified Circadian and Photophobic Responses to Light in Mice

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Stewart Thompson; Frederick R. Blodi; Demelza R. Larson; Michael G. Anderson; Steven F. Stasheff
TAGS: macular dystrophy, melanopsin, mice, mutation, perceptual masking, retina
Invest. Ophthalmol. Vis. Sci.. 2019; 60(6):2110-2117. https://doi.org/10.1167/iovs.19-26881

Includes: Supplemental Content

ARVO Annual Meeting Abstract June 2017

Diabetes induced neurodegeneration in the retina and the brain of mice are associated and independent of microvasculopathy

Chunhua Jiao; Michael David Abramoff; Kyungmoo Lee; Ipek Oguz; Peter Adamson; Adam Hedberg-Buenz; Michael G Anderson; Elliott Sohn

Invest. Ophthalmol. Vis. Sci.. 2017; 58(8):5195.

ARVO Annual Meeting Abstract September 2016

RGC death in a mouse model of congenital glaucoma

Steffi Daniel; Michael G Anderson; Abbot F Clark; Colleen M McDowell

Invest. Ophthalmol. Vis. Sci.. 2016; 57(12):2521.

ARVO Annual Meeting Abstract September 2016

Correlations between nuclear size and selective ganglion cell loss in mouse models of glaucoma

Michael G Anderson; Adam Hedberg-Buenz; Carly Lewis; Kacie J Meyer

Invest. Ophthalmol. Vis. Sci.. 2016; 57(12):2534.

Cornea August 2015

Genetic Evidence for Differential Regulation of Corneal Epithelial and Stromal Thickness

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Demelza R. Koehn; Kacie J. Meyer; Michael G. Anderson
TAGS: cornea, epithelium, genes, genetics, mice, quantitative trait loci, regulation, phenotype, genome
Invest. Ophthalmol. Vis. Sci.. 2015; 56(9):5599-5607. https://doi.org/10.1167/iovs.15-17179

Includes: Supplemental Content

ARVO Annual Meeting Abstract June 2015

Adaptive immune responses in glaucoma promote IOP-independent RCG loss

Oliver W Gramlich; Qiong Ding; Michael G Anderson; Markus H Kuehn

Invest. Ophthalmol. Vis. Sci.. 2015; 56(7 ):1694.

ARVO Annual Meeting Abstract June 2015

AxonJ: Validation of an Automated Axon Counting Method in Rodent Models of Glaucoma

Kasra Zarei; John H Fingert; Mark Christopher; Kathy Miller; Michael G Anderson; Adam Hedberg-Buenz; Anamika Tandon; Todd E Scheetz; Michael David Abramoff

Invest. Ophthalmol. Vis. Sci.. 2015; 56(7 ):2427.

ARVO Annual Meeting Abstract June 2015

Retinal ganglion cell density and vascular proximity in a mouse model of glaucoma

Carly Lewis; Adam Hedberg-Buenz; Michael G Anderson

Invest. Ophthalmol. Vis. Sci.. 2015; 56(7 ):2436.

Retina December 2014

Early Detection of Subclinical Visual Damage After Blast-Mediated TBI Enables Prevention of Chronic Visual Deficit by Treatment With P7C3-S243

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Laura M. Dutca; Steven F. Stasheff; Adam Hedberg-Buenz; Danielle S. Rudd; Nikhil Batra; Frederick R. Blodi; Matthew S. Yorek; Terry Yin; Malini Shankar; Judith A. Herlein; Jacinth Naidoo; Lorraine Morlock; Noelle Williams; Randy H. Kardon; Michael G. Anderson; Andrew A. Pieper; Matthew M. Harper
TAGS: basic local alignment search tool, blast injuries, physiology, traumatic brain injuries, mice, prevention, retinal ganglion cells, early diagnosis, wounds and injuries
Invest. Ophthalmol. Vis. Sci.. 2014; 55(12):8330-8341. https://doi.org/10.1167/iovs.14-15468

ARVO Annual Meeting Abstract April 2014

Investigating the influence of blast on cellularity in the retinal ganglion cell layer in a mouse model of blast-induced traumatic brain injury using a novel semi-automated technique

Adam Hedberg-Buenz; Matthew M. Harper; Mark Christopher; Laura Dutca; Todd Scheetz; Randy H Kardon; Michael G Anderson

Invest. Ophthalmol. Vis. Sci.. 2014; 55(13):1737.

ARVO Annual Meeting Abstract April 2014

Time-dependent changes in spontaneous and light-evoked retinal ganglion cell activity in a mouse model of blast-induced traumatic brain injury

Laura Dutca; Frederick R Blodi; Adam Hedberg-Buenz; Malini Shankar; Michael G Anderson; Randy H Kardon; Steven F Stasheff; Matthew M. Harper

Invest. Ophthalmol. Vis. Sci.. 2014; 55(13):2383.

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AxoNet 2.0: A Deep Learning-Based Tool for Morphometric Analysis of Retinal Ganglion Cell Axons

Biological Correlations and Confounders for Quantification of Retinal Ganglion Cells by Optical Coherence Tomography Based on Studies of Outbred Mice

Novel risk factor gene for POAG identified with GWAS of Ocular Hypertension Treatment Study

Consensus Recommendation for Mouse Models of Ocular Hypertension to Study Aqueous Humor Outflow and Its Mechanisms

AxonDeep: Automated Optic Nerve Axon Segmentation in Mice With Deep Learning

The Retinal Ganglion Cell Response to Blast-Mediated Traumatic Brain Injury Is Genetic Background Dependent

Blast Preconditioning Protects Retinal Ganglion Cells and Reveals Targets for Prevention of Neurodegeneration Following Blast-Mediated Traumatic Brian Injury

Correlation of retinal ganglion cell metrics made in vivo using SD-OCT versus ex vivo using quantitative histology in Diversity Outbred mice

Blast-Mediated Traumatic Brain Injury Exacerbates Retinal Damage and Amyloidosis in the APPswePSENd19e Mouse Model of Alzheimer's Disease

The Efemp1 R345W Macular Dystrophy Mutation Causes Amplified Circadian and Photophobic Responses to Light in Mice

Diabetes induced neurodegeneration in the retina and the brain of mice are associated and independent of microvasculopathy

RGC death in a mouse model of congenital glaucoma

Correlations between nuclear size and selective ganglion cell loss in mouse models of glaucoma

Genetic Evidence for Differential Regulation of Corneal Epithelial and Stromal Thickness

Adaptive immune responses in glaucoma promote IOP-independent RCG loss

AxonJ: Validation of an Automated Axon Counting Method in Rodent Models of Glaucoma

Retinal ganglion cell density and vascular proximity in a mouse model of glaucoma

Early Detection of Subclinical Visual Damage After Blast-Mediated TBI Enables Prevention of Chronic Visual Deficit by Treatment With P7C3-S243

Investigating the influence of blast on cellularity in the retinal ganglion cell layer in a mouse model of blast-induced traumatic brain injury using a novel semi-automated technique

Time-dependent changes in spontaneous and light-evoked retinal ganglion cell activity in a mouse model of blast-induced traumatic brain injury

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